Core Modules
============

Core framework modules for pipeline execution, configuration, and CLI.

Pipeline Executor
-----------------

.. automodule:: ideal_genom.core.pipeline
   :members:
   :undoc-members:
   :show-inheritance:

Configuration
-------------

.. automodule:: ideal_genom.core.config
   :members:
   :undoc-members:
   :show-inheritance:

Command Line Interface
----------------------

.. automodule:: ideal_genom.core.cli
   :members:
   :undoc-members:
   :show-inheritance:

Executor
--------

.. automodule:: ideal_genom.core.executor
   :members:
   :undoc-members:
   :show-inheritance: